Mapped reads for uncultivated Tenacibaculum bacterium UBA8975 genome ... - SRA

SRX3765755: Mapped reads for uncultivated Tenacibaculum bacterium UBA8975 genome recovered from ERX288955
1 ILLUMINA (unspecified) run: 348,528 spots, 64.8M bases, 33.5Mb downloads

Design: Reads from ERX288955 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8975 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Tenacibaculum bacterium UBA8975 genome recovered from ERX288955

SAMN08017986 • SRS3020588 • All experiments • All runs

Organism: Tenacibaculum sp.

Library:

Name: UBA8975_library

Instrument: unspecified

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 348,528 spots, 64.8M bases, 33.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR6807478	348,528	64.8M	33.5Mb	2018-03-06

ID:: 5190800

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